Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACTRT1Actin related protein T1. (377 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.894
ARPC2
Actin related protein 2/3 complex subunit 2.
   
 0.838
SMARCD1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
   
 0.832
CFL2
Cofilin 2.
   
 0.827
SLC2A4RG
SLC2A4 regulator.
      
 0.826
PFN4
Profilin family member 4.
   
 0.815
ENSCWAP00000012544
annotation not available
   
 0.813
ARPC3
Actin related protein 2/3 complex subunit 3.
    
 0.806
ARPC5
Actin related protein 2/3 complex subunit 5.
    
 0.806
ARPC1A
Actin related protein 2/3 complex subunit 1A.
   
 0.804
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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