Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYCP1Synaptonemal complex protein 1. (939 aa)    
Predicted Functional Partners:
SYCE1
Synaptonemal complex central element protein 1.
    
 0.987
SYCE2
Synaptonemal complex central element protein 2.
    
 0.986
SYCE3
Synaptonemal complex central element protein 3.
    
 0.981
SYCP2
Synaptonemal complex protein 2.
   
 0.976
TEX12
Testis expressed 12.
    
 0.961
SYCP3
Synaptonemal complex protein 3.
    
 0.950
REC8
REC8 meiotic recombination protein.
    
 0.893
SMC3
Structural maintenance of chromosomes 3.
    
 0.795
ENSCWAP00000002966
annotation not available
   
    0.788
ENSCWAP00000002981
annotation not available
   
    0.788
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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