STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM170ATransmembrane protein 170A. (121 aa)    
Predicted Functional Partners:
BCAR1
BCAR1 scaffold protein, Cas family member.
      
 0.764
KIAA1109
KIAA1109.
    
   0.746
CFDP1
Craniofacial development protein 1.
      
 0.621
MCPH1
Microcephalin 1.
      
 0.612
LRIG2
Leucine rich repeats and immunoglobulin like domains 2.
      
 0.585
OSBPL3
Oxysterol binding protein like 3.
      
 0.582
NDC1
NDC1 transmembrane nucleoporin.
      
 0.577
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
      
 0.574
NUP93
Nucleoporin 93.
      
 0.530
ANKLE2
Ankyrin repeat and LEM domain containing 2.
      
 0.522
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.