STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000003041annotation not available (501 aa)    
Predicted Functional Partners:
KPNA6
Karyopherin subunit alpha 6.
    
 
 0.608
ZBTB25
Zinc finger and BTB domain containing 25.
      
 0.587
USHBP1
USH1 protein network component harmonin binding protein 1.
    
 
 0.572
CUL3
Cullin 3.
    
 0.548
SPATA6
Spermatogenesis associated 6.
      
 0.522
SPIN4
Spindlin family member 4.
      
 0.506
PRR14
Proline rich 14.
      
 0.463
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
      
 0.446
MCM3AP
Minichromosome maintenance complex component 3 associated protein.
      
 0.434
ENSCWAP00000005624
annotation not available
      
 0.405
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.