Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FHL2Four and a half LIM domains 2. (279 aa)    
Predicted Functional Partners:
FHL3
Four and a half LIM domains 3.
    
  0.975
EGFR
Epidermal growth factor receptor.
   
 
 0.950
CNOT1
CCR4-NOT transcription complex subunit 1.
    
   0.928
TRAF6
TNF receptor associated factor 6.
    
 0.926
FHL1
Four and a half LIM domains 1.
    
  0.912
TRAF2
TNF receptor associated factor 2.
    
 0.910
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 
 0.894
BRCA1
BRCA1 DNA repair associated.
    
 
 0.886
CTNNB1
Catenin beta 1.
    
 
 0.875
ZNF131
Zinc finger protein 131.
    
   0.873
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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