Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSX2IPSSX family member 2 interacting protein. (614 aa)    
Predicted Functional Partners:
WRAP73
WD repeat containing, antisense to TP73.
    
 
 0.977
AFDN
Afadin, adherens junction formation factor.
    
 0.952
ACTN1
Actinin alpha 1.
    
 0.928
CELF1
CUGBP Elav-like family member 1.
   
 
 0.924
CELF2
CUGBP Elav-like family member 2.
   
 
 0.924
CCDC14
Coiled-coil domain containing 14.
    
 
 0.922
STAU1
Staufen double-stranded RNA binding protein 1.
    
 
 0.919
STAU2
Staufen double-stranded RNA binding protein 2.
    
 
 0.919
ACTN4
Actinin alpha 4.
    
 0.918
PCM1
Pericentriolar material 1.
    
 
 0.883
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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