Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF608Zinc finger protein 608. (1512 aa)    
Predicted Functional Partners:
ATN1
Atrophin 1.
   
 
 0.827
GRAMD2B
GRAM domain containing 2B.
      
 0.761
RCBTB2
RCC1 and BTB domain containing protein 2.
      
 0.754
TUBGCP4
Tubulin gamma complex associated protein 4.
      
 0.735
BEAN1
Brain expressed associated with NEDD4 1.
      
 0.735
FEM1C
Fem-1 homolog C.
      
 0.705
SRFBP1
Serum response factor binding protein 1.
      
 0.666
NOL4L
Nucleolar protein 4 like.
      
 0.656
APCDD1L
APC down-regulated 1 like.
      
 0.655
ZNF831
Zinc finger protein 831.
   
  
 0.655
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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