STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMYD3SET and MYND domain containing 3. (428 aa)    
Predicted Functional Partners:
MAP3K2
Mitogen-activated protein kinase kinase kinase 2.
    
 
 0.968
TP53
Tumor protein p53.
    
 0.950
DOT1L
DOT1 like histone lysine methyltransferase.
    
 0.944
KMT2E
Lysine methyltransferase 2E.
    
 0.916
SETD7
SET domain containing 7, histone lysine methyltransferase.
   
 
 0.916
SETD2
SET domain containing 2, histone lysine methyltransferase.
     
 0.912
MAP3K3
Mitogen-activated protein kinase kinase kinase 3.
    
 
 0.898
SUV39H1
Suppressor of variegation 3-9 homolog 1.
   
 
 0.896
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.895
NSD3
Nuclear receptor binding SET domain protein 3.
     
 0.895
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.