Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECRG4ECRG4 augurin precursor. (147 aa)    
Predicted Functional Partners:
C11orf58
Chromosome 11 open reading frame 58.
      
 0.587
TAF1D
TATA-box binding protein associated factor, RNA polymerase I subunit D.
      
 0.571
CLEC3A
C-type lectin domain family 3 member A.
      
 0.540
ANAPC10
Anaphase promoting complex subunit 10.
      
 0.519
COL8A1
Collagen type VIII alpha 1 chain.
   
  
 0.517
SCARF1
Scavenger receptor class F member 1.
      
 0.478
FIGN
Fidgetin, microtubule severing factor.
      
 0.461
FIGNL2
Fidgetin like 2.
      
 0.461
SPTSSB
Serine palmitoyltransferase small subunit B.
      
 0.448
FBXO2
F-box protein 2.
      
 0.438
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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