Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VEGFCVascular endothelial growth factor C. (418 aa)    
Predicted Functional Partners:
FLT4
Fms related tyrosine kinase 4.
    
 0.998
KDR
Kinase insert domain receptor.
    
 0.991
FLT1
Fms related tyrosine kinase 1.
    
 0.990
VEGFB
Vascular endothelial growth factor B.
     
 0.963
PDGFD
Platelet derived growth factor D.
     
 0.956
NRP2
Neuropilin 2.
    
 
 0.954
PDGFRB
Platelet derived growth factor receptor beta.
    
 0.947
PDGFC
Platelet derived growth factor C.
     
 0.946
PDGFRA
Platelet derived growth factor receptor alpha.
    
 0.941
FLT3
Fms related tyrosine kinase 3.
    
 0.941
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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