Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD180CD180 molecule. (661 aa)    
Predicted Functional Partners:
LY86
Lymphocyte antigen 86.
  
 0.999
LY96
Lymphocyte antigen 96.
    
 0.890
TIRAP
TIR domain containing adaptor protein.
    
 0.706
CD84
CD84 molecule.
   
 
 0.663
UNC93B1
Unc-93 homolog B1, TLR signaling regulator.
   
 0.637
ENSCWAP00000008503
annotation not available
   
 
 0.634
SARM1
Sterile alpha and TIR motif containing 1.
     
 0.634
CLEC9A
C-type lectin domain containing 9A.
    
 
 0.622
UNC93A
Unc-93 homolog A.
    
 0.621
P2RY8
P2Y receptor family member 8.
    
 
 0.615
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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