STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DENND4BDENN domain containing 4B. (1493 aa)    
Predicted Functional Partners:
CTU2
Cytosolic thiouridylase subunit 2.
    
 
 0.835
RAB8B
RAB8B, member RAS oncogene family.
    
 0.818
DENND1C
DENN domain containing 1C.
    
 
 0.790
RAB10
RAB10, member RAS oncogene family.
    
 0.777
DENND5B
DENN domain containing 5B.
    
 
 0.760
CCDC102A
Coiled-coil domain containing 102A.
      
 0.760
TMEM129
Transmembrane protein 129.
      
 0.754
RAB8A
RAB8A, member RAS oncogene family.
    
 0.749
PTER
Phosphotriesterase related.
    
 0.724
DENND5A
DENN domain containing 5A.
    
 
 0.718
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.