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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPLANE1Ciliogenesis and planar polarity effector 1. (3137 aa)    
Predicted Functional Partners:
SLC9C1
Solute carrier family 9 member C1.
      
 0.689
FUT10
Fucosyltransferase 10.
      
 0.687
SCAPER
S-phase cyclin A associated protein in the ER.
      
 0.658
USP24
Ubiquitin specific peptidase 24.
      
 0.658
TCTN3
Tectonic family member 3.
      
 0.655
DDX59
DEAD-box helicase 59.
      
 0.633
BSND
Barttin CLCNK type accessory beta subunit.
      
 0.621
OFD1
OFD1 centriole and centriolar satellite protein.
      
 0.597
PARM1
Prostate androgen-regulated mucin-like protein 1.
      
 0.556
PSMA4
Proteasome 20S subunit alpha 4.
      
 0.555
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.