Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SPG21SPG21 abhydrolase domain containing, maspardin. (325 aa)    
Predicted Functional Partners:
ATPAF2
ATP synthase mitochondrial F1 complex assembly factor 2.
   
   0.921
RAB7A
RAB7A, member RAS oncogene family.
    
   0.885
VAMP7
Vesicle associated membrane protein 7.
    
   0.882
ALDH16A1
Aldehyde dehydrogenase 16 family member A1.
      
 0.774
ENSCWAP00000013998
annotation not available
    
   0.761
ENSCWAP00000015710
annotation not available
    
   0.761
ENSCWAP00000003537
annotation not available
      
 0.754
SPG11
SPG11 vesicle trafficking associated, spatacsin.
      
 0.754
CD84
CD84 molecule.
      
 0.754
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
      
 0.754
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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