Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGAAspartylglucosaminidase. (345 aa)    
Predicted Functional Partners:
RAB1B
RAB1B, member RAS oncogene family.
     
  0.760
RAB1A
RAB1A, member RAS oncogene family.
     
  0.760
MOB4
MOB family member 4, phocein.
    
   0.729
ASNS
Asparagine synthetase (glutamine-hydrolyzing).
     
 0.684
ENSCWAP00000013289
annotation not available
     
 0.684
FH
Fumarate hydratase.
     
  0.679
OTC
Ornithine carbamoyltransferase.
     
 0.675
ENSCWAP00000008238
annotation not available
     
  0.656
NSUN5
NOP2/Sun RNA methyltransferase 5.
      
 0.635
HSPG2
Heparan sulfate proteoglycan 2.
      
 0.587
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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