STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM124AFamily with sequence similarity 124 member A. (543 aa)    
Predicted Functional Partners:
PRKG1
Protein kinase cGMP-dependent 1.
    
   0.778
FAM160B1
Family with sequence similarity 160 member B1.
      
 0.754
HABP2
Hyaluronan binding protein 2.
   
 0.754
FAM167B
Family with sequence similarity 167 member B.
      
 0.753
LRRC41
Leucine rich repeat containing 41.
      
 0.709
OLA1
Obg like ATPase 1.
     
 0.644
ENSCWAP00000004417
annotation not available
      
 0.638
ENSCWAP00000024259
annotation not available
    
 
 0.601
F12
Coagulation factor XII.
   
 0.587
HGFAC
HGF activator.
   
 0.587
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.