Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD2BGRAM domain containing 2B. (447 aa)    
Predicted Functional Partners:
GRAMD1C
GRAM domain containing 1C.
    
 
 0.958
GRAMD1B
GRAM domain containing 1B.
    
 
 0.946
ENSCWAP00000004950
annotation not available
    
   0.905
ENSCWAP00000017121
annotation not available
    
   0.905
TXLNG
Taxilin gamma.
    
   0.824
EFCAB14
EF-hand calcium binding domain 14.
   
   0.820
GRAMD1A
GRAM domain containing 1A.
    
 
 0.805
MYRF
Myelin regulatory factor.
    
   0.805
CASC4
Cancer susceptibility 4.
    
   0.788
FEM1C
Fem-1 homolog C.
    
 
 0.762
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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