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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM98CFamily with sequence similarity 98 member C. (360 aa)    
Predicted Functional Partners:
RTRAF
RNA transcription, translation and transport factor.
    
 0.970
DDX1
DEAD-box helicase 1.
   
 0.958
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
    
 0.915
C2orf49
Chromosome 2 open reading frame 49.
     
 0.890
FAM98B
Family with sequence similarity 98 member B.
  
  
 
0.885
FAM98A
Family with sequence similarity 98 member A.
  
  
 
0.884
YIPF6
Yip1 domain family member 6.
      
 0.669
CD2BP2
CD2 cytoplasmic tail binding protein 2.
      
 0.659
ENSCWAP00000008297
annotation not available
      
 0.623
STXBP2
Syntaxin binding protein 2.
      
 0.602
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.