Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM98CFamily with sequence similarity 98 member C. (360 aa)    
Predicted Functional Partners:
RTRAF
RNA transcription, translation and transport factor.
    
 0.967
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
    
 0.928
DDX1
DEAD-box helicase 1.
   
 0.915
NUFIP2
Nuclear FMR1 interacting protein 2.
    
 
 0.786
FAM98B
Family with sequence similarity 98 member B.
  
 
 
0.589
YIPF6
Yip1 domain family member 6.
      
 0.587
CD2BP2
CD2 cytoplasmic tail binding protein 2.
      
 0.583
THOC7
THO complex 7.
      
 0.575
CEP41
Centrosomal protein 41.
      
 0.574
C2orf49
Chromosome 2 open reading frame 49.
     
 0.572
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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