Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GSDMAGasdermin A. (446 aa)    
Predicted Functional Partners:
DSG4
Desmoglein 4.
  
 
 
 0.707
CASP14
Caspase 14.
  
  
 0.658
ENSCWAP00000008302
annotation not available
      
 0.656
BIRC7
Baculoviral IAP repeat containing 7.
      
 0.592
GSDME
Gasdermin E.
      
 0.583
KPRP
Keratinocyte proline rich protein.
   
 
 0.576
ENSCWAP00000008158
annotation not available
   
  
 0.554
GART
annotation not available
      
 0.550
TGM5
Transglutaminase 5.
   
  
 0.525
FAM3B
Family with sequence similarity 3 member B.
      
 0.516
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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