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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000003196annotation not available (178 aa)    
Predicted Functional Partners:
NHP2
NHP2 ribonucleoprotein.
   
 
 0.909
NIP7
Nucleolar pre-rRNA processing protein NIP7.
   
  
 0.890
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 
 0.881
WDR12
WD repeat domain 12.
   
  
 0.873
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
    0.863
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.850
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
  
 0.844
RRP15
Ribosomal RNA processing 15 homolog.
   
  
 0.831
ZNF593
Zinc finger protein 593.
   
  
 0.806
EBNA1BP2
EBNA1 binding protein 2.
   
    0.806
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.