STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000003196annotation not available (178 aa)    
Predicted Functional Partners:
NIP7
Nucleolar pre-rRNA processing protein NIP7.
   
 
 0.955
MRTO4
MRT4 homolog, ribosome maturation factor.
   
  
 0.920
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
  
 0.881
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.878
AIMP2
Aminoacyl tRNA synthetase complex interacting multifunctional protein 2.
   
  
 0.846
NHP2
NHP2 ribonucleoprotein.
   
 
 0.838
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
    0.836
RRS1
Ribosome biogenesis regulator 1 homolog.
   
  
 0.817
RPL3
Ribosomal protein L3.
   
   0.810
WDR12
WD repeat domain 12.
   
  
 0.806
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.