STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SREK1Splicing regulatory glutamic acid and lysine rich protein 1. (631 aa)    
Predicted Functional Partners:
SRSF10
Serine and arginine rich splicing factor 10.
   
 0.988
SRSF11
Serine and arginine rich splicing factor 11.
   
   0.984
SRSF2
Serine and arginine rich splicing factor 2.
   
 0.984
PNN
Pinin, desmosome associated protein.
   
 
 0.982
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.975
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.971
PNISR
PNN interacting serine and arginine rich protein.
   
 
 0.967
RBM39
RNA binding motif protein 39.
   
 
 0.967
ENSCWAP00000027154
annotation not available
   
 
 0.967
RBM23
RNA binding motif protein 23.
   
 
 0.967
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.