STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UCMAUpper zone of growth plate and cartilage matrix associated. (132 aa)    
Predicted Functional Partners:
EFCAB2
EF-hand calcium binding domain 2.
      
 0.697
SERGEF
Secretion regulating guanine nucleotide exchange factor.
      
 0.634
FIBIN
Fin bud initiation factor homolog.
      
 0.633
C1orf115
Chromosome 1 open reading frame 115.
      
 0.614
LYZL4
Lysozyme like 4.
      
 0.614
USH1C
USH1 protein network component harmonin.
      
 0.600
PMPCB
Peptidase, mitochondrial processing beta subunit.
      
 0.587
RASGEF1C
RasGEF domain family member 1C.
      
 0.584
ENSCWAP00000015091
annotation not available
      
 0.582
ZNF536
Zinc finger protein 536.
      
 0.581
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.