STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAMD13Sterile alpha motif domain containing 13. (116 aa)    
Predicted Functional Partners:
TRRAP
Transformation/transcription domain associated protein.
    
 0.887
MEAF6
MYST/Esa1 associated factor 6.
    
 0.881
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 0.860
RUVBL1
RuvB like AAA ATPase 1.
   
 0.825
ENSCWAP00000023743
annotation not available
    
 0.815
ARID4A
AT-rich interaction domain 4A.
   
 0.786
ARID4B
AT-rich interaction domain 4B.
   
 0.786
MCRS1
Microspherule protein 1.
    
 0.776
BRPF3
Bromodomain and PHD finger containing 3.
    
 0.773
BRD1
Bromodomain containing 1.
    
 0.773
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.