Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PAAF1Proteasomal ATPase associated factor 1. (392 aa)    
Predicted Functional Partners:
PSMD10
Proteasome 26S subunit, non-ATPase 10.
    
 0.991
PSMC4
Proteasome 26S subunit, ATPase 4.
    
 0.987
PSMC5
Proteasome 26S subunit, ATPase 5.
    
 0.986
PSMC3
Proteasome 26S subunit, ATPase 3.
    
 0.986
PSMD4
Proteasome 26S subunit, non-ATPase 4.
    
 0.985
PSMC2
Proteasome 26S subunit, ATPase 2.
    
 0.985
ADRM1
Adhesion regulating molecule 1.
    
 0.984
PSMD14
Proteasome 26S subunit, non-ATPase 14.
    
 0.984
PSMD3
Proteasome 26S subunit, non-ATPase 3.
    
 0.984
PSMC1
Proteasome 26S subunit, ATPase 1.
    
 0.984
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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