STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1orf194Chromosome 1 open reading frame 194. (170 aa)    
Predicted Functional Partners:
CFAP52
Cilia and flagella associated protein 52.
   
 
 0.977
RIBC1
RIB43A domain with coiled-coils 1.
   
 
 0.968
CFAP126
Cilia and flagella associated protein 126.
   
   0.962
NME7
NME/NM23 family member 7.
    
 
 0.961
ENSCWAP00000025274
annotation not available
   
 
 0.961
RIBC2
RIB43A domain with coiled-coils 2.
   
 
 0.958
ZMYND12
Zinc finger MYND-type containing 12.
   
 
 0.950
CCDC65
Coiled-coil domain containing 65.
   
 
 0.942
ENKUR
Enkurin, TRPC channel interacting protein.
   
   0.920
C1orf158
Chromosome 1 open reading frame 158.
   
   0.919
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.