STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HDAC9Histone deacetylase 9. (1068 aa)    
Predicted Functional Partners:
H2AZ2
H2A.Z variant histone 2.
   
 0.920
MACROH2A1
macroH2A.1 histone.
    
 0.912
MACROH2A2
macroH2A.2 histone.
    
 0.912
NCOR1
Nuclear receptor corepressor 1.
    
 0.908
H2AZ1
H2A.Z variant histone 1.
   
 0.903
ENSCWAP00000012643
annotation not available
    
 0.899
H2BU1
H2B.U histone 1.
    
 0.899
H2BE1
H2B.E variant histone 1.
    
 0.896
H2AX
H2A.X variant histone.
    
 0.894
NCOR2
Nuclear receptor corepressor 2.
   
 0.894
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.