STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000003256annotation not available (457 aa)    
Predicted Functional Partners:
SMC6
Structural maintenance of chromosomes 6.
    
   0.889
NSMCE1
NSE1 homolog, SMC5-SMC6 complex component.
    
   0.862
ENSCWAP00000028954
annotation not available
    
 
 0.837
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.714
RANBP2
RAN binding protein 2.
    
 0.677
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.657
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.654
MC2R
Melanocortin 2 receptor.
      
 0.642
NUP133
Nucleoporin 133.
   
 0.639
NUP107
Nucleoporin 107.
    
 0.632
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.