Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THOC3THO complex 3. (351 aa)    
Predicted Functional Partners:
THOC2
THO complex 2.
    
 0.999
THOC6
THO complex 6.
   
 0.999
THOC1
THO complex 1.
    
 0.999
THOC7
THO complex 7.
   
 0.999
THOC5
THO complex 5.
   
 0.999
ALYREF
Aly/REF export factor.
   
 0.998
DDX39B
DExD-box helicase 39B.
    
 0.982
SARNP
SAP domain containing ribonucleoprotein.
    
 0.981
DDX39A
DExD-box helicase 39A.
    
 0.974
ZC3H13
Zinc finger CCCH-type containing 13.
    
 0.964
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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