STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUXBDouble homeobox B. (332 aa)    
Predicted Functional Partners:
ENSCWAP00000004319
annotation not available
    
 0.780
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.775
CACTIN
Cactin, spliceosome C complex subunit.
    
 0.775
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 0.737
ADAT1
Adenosine deaminase tRNA specific 1.
      
 0.616
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
    
 0.604
TMEM238L
Transmembrane protein 238 like.
    
 0.604
TMEM238
Transmembrane protein 238.
    
 0.604
CRX
Cone-rod homeobox.
    
 0.591
ZMAT1
Zinc finger matrin-type 1.
      
 0.588
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.