STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMT2Base methyltransferase of 25S rRNA 2 homolog. (405 aa)    
Predicted Functional Partners:
ITFG2
Integrin alpha FG-GAP repeat containing 2.
    
 0.990
C12orf66
Chromosome 12 open reading frame 66.
    
 0.989
ENSCWAP00000010986
annotation not available
    
 0.988
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.980
KPTN
Kaptin, actin binding protein.
    
 0.978
NPRL3
NPR3 like, GATOR1 complex subunit.
   
 0.962
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 0.958
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 0.926
GYS1
Glycogen synthase 1.
   
 0.914
GYS2
Glycogen synthase 2.
   
 0.914
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.