STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERTAD3SERTA domain containing 3. (197 aa)    
Predicted Functional Partners:
USHBP1
USH1 protein network component harmonin binding protein 1.
    
   0.811
UBL5
Ubiquitin like 5.
    
   0.776
ENSCWAP00000012079
annotation not available
    
   0.776
STN1
STN1 subunit of CST complex.
    
 
 0.609
ZC3H18
Zinc finger CCCH-type containing 18.
      
 0.604
MRPS18A
Mitochondrial ribosomal protein S18A.
      
 0.585
SERTAD4
SERTA domain containing 4.
      
 0.583
RNLS
Renalase, FAD dependent amine oxidase.
      
 0.582
SERTAD2
SERTA domain containing 2.
   
  
 0.582
INPP5A
Inositol polyphosphate-5-phosphatase A.
      
 0.582
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.