STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM168Transmembrane protein 168. (697 aa)    
Predicted Functional Partners:
CCDC70
Coiled-coil domain containing 70.
      
 0.596
ARMCX2
Armadillo repeat containing X-linked 2.
      
 0.562
THRAP3
Thyroid hormone receptor associated protein 3.
      
 0.555
TMEM140
Transmembrane protein 140.
      
 0.554
TMEM63B
Transmembrane protein 63B.
      
 0.548
MRPL57
Mitochondrial ribosomal protein L57.
      
 0.547
ADNP2
ADNP homeobox 2.
      
 0.522
TMEM170B
Transmembrane protein 170B.
      
 0.522
OLFML1
Olfactomedin like 1.
      
 0.511
ARHGAP20
Rho GTPase activating protein 20.
      
 0.489
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.