STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM168Transmembrane protein 168. (697 aa)    
Predicted Functional Partners:
FAM174A
Family with sequence similarity 174 member A.
    
   0.806
OGFOD2
2-oxoglutarate and iron dependent oxygenase domain containing 2.
      
 0.672
TMEM158
Transmembrane protein 158 (gene/pseudogene).
      
 0.582
TMEM98
Transmembrane protein 98.
      
 0.564
FAM13A
Family with sequence similarity 13 member A.
      
 0.561
MFSD13A
Major facilitator superfamily domain containing 13A.
      
 0.560
IFRD1
Interferon related developmental regulator 1.
      
 0.547
TMEM45A
Transmembrane protein 45A.
      
 0.519
USP2
Ubiquitin specific peptidase 2.
      
 0.503
PHF14
PHD finger protein 14.
      
 0.486
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.