Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR7WD repeat domain 7. (1490 aa)    
Predicted Functional Partners:
DMXL2
Dmx like 2.
   
 
 0.988
ROGDI
Rogdi atypical leucine zipper.
   
 
 0.958
ENSCWAP00000007169
ATP6V1G2-DDX39B readthrough (NMD candidate).
    
 
 0.949
DMXL1
Dmx like 1.
   
 
 0.945
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.944
ATP6V1C2
ATPase H+ transporting V1 subunit C2.
    
 
 0.940
ENSCWAP00000016610
annotation not available
    
 
 0.931
ATP6V1G1
ATPase H+ transporting V1 subunit G1.
    
 
 0.931
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
    
 
 0.930
ATP6V1H
ATPase H+ transporting V1 subunit H.
    
 
 0.924
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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