STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LSMEM1Leucine rich single-pass membrane protein 1. (128 aa)    
Predicted Functional Partners:
ETNPPL
Ethanolamine-phosphate phospho-lyase.
      
 0.749
LSMEM2
Leucine rich single-pass membrane protein 2.
    
   0.739
ZBTB1
Zinc finger and BTB domain containing 1.
      
 0.672
SMPX
Small muscle protein X-linked.
   
  
 0.613
ZFAND2A
Zinc finger AN1-type containing 2A.
      
 0.588
LRRC2
Leucine rich repeat containing 2.
   
  
 0.587
RGS22
Regulator of G protein signaling 22.
      
 0.583
PHYKPL
5-phosphohydroxy-L-lysine phospho-lyase.
      
 0.581
CELSR1
Cadherin EGF LAG seven-pass G-type receptor 1.
      
 0.577
NEURL2
Neuralized E3 ubiquitin protein ligase 2.
      
 0.577
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.