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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSMEM1Leucine rich single-pass membrane protein 1. (128 aa)    
Predicted Functional Partners:
ETNPPL
Ethanolamine-phosphate phospho-lyase.
      
 0.763
ZBTB1
Zinc finger and BTB domain containing 1.
      
 0.745
PPP1R3A
Protein phosphatase 1 regulatory subunit 3A.
   
  
 0.674
WDR47
WD repeat domain 47.
      
 0.629
RGS22
Regulator of G protein signaling 22.
      
 0.629
ZFAND2A
Zinc finger AN1-type containing 2A.
      
 0.629
CELSR1
Cadherin EGF LAG seven-pass G-type receptor 1.
      
 0.627
SERPINC1
Serpin family C member 1.
      
 0.612
RCC1
Regulator of chromosome condensation 1.
      
 0.600
C6orf58
Chromosome 6 open reading frame 58.
      
 0.594
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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