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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX13Sorting nexin 13. (957 aa)    
Predicted Functional Partners:
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.730
ANKRD46
Ankyrin repeat domain 46.
    
 
 0.697
GREB1L
GREB1 like retinoic acid receptor coactivator.
      
 0.679
SNX16
Sorting nexin 16.
      
 0.675
CEP70
Centrosomal protein 70.
      
 0.667
SNX14
Sorting nexin 14.
   
 
0.661
COMMD9
COMM domain containing 9.
      
 0.631
VPS36
Vacuolar protein sorting 36 homolog.
      
 0.618
ARL4A
ADP ribosylation factor like GTPase 4A.
     
 0.615
SLC30A7
Solute carrier family 30 member 7.
      
 0.614
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.