Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYNJ1Synaptojanin 1. (1608 aa)    
Predicted Functional Partners:
SH3GL2
SH3 domain containing GRB2 like 2, endophilin A1.
    
 
 0.983
SNX9
Sorting nexin 9.
   
 
 0.975
AMPH
Amphiphysin.
   
 
 0.971
ITSN2
Intersectin 2.
   
 
 0.964
SACM1L
SAC1 like phosphatidylinositide phosphatase.
    
 0.944
SYNJ2
Synaptojanin 2.
     
 0.939
PIP4K2A
Phosphatidylinositol-5-phosphate 4-kinase type 2 alpha.
    
 0.938
INPP4A
Inositol polyphosphate-4-phosphatase type I A.
     
 0.937
AP2M1
Adaptor related protein complex 2 subunit mu 1.
    
 
 0.934
ITSN1
Intersectin 1.
   
 
 0.929
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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