STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF3Membrane associated ring-CH-type finger 3. (253 aa)    
Predicted Functional Partners:
STX6
Syntaxin 6.
    
 
 0.897
CFTR
CF transmembrane conductance regulator.
    
 
 0.776
STX10
Syntaxin 10.
    
 
 0.723
MYO1G
Myosin IG.
      
 0.643
FLYWCH1
FLYWCH-type zinc finger 1.
      
 0.633
KHNYN
KH and NYN domain containing.
      
 0.628
UBR1
Ubiquitin protein ligase E3 component n-recognin 1.
   
 
 0.624
UBR2
Ubiquitin protein ligase E3 component n-recognin 2.
   
 
 0.617
MARCHF5
Membrane associated ring-CH-type finger 5.
   
  
 0.610
ENSCWAP00000004650
annotation not available
   
  
 0.609
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.