STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000003326annotation not available (120 aa)    
Predicted Functional Partners:
PUM2
Pumilio RNA binding family member 2.
    
 
 0.814
PUM1
Pumilio RNA binding family member 1.
    
 
 0.814
RPP25L
Ribonuclease P/MRP subunit p25 like.
      
 0.609
PDIA6
Protein disulfide isomerase family A member 6.
      
 0.589
MFSD8
Major facilitator superfamily domain containing 8.
      
 0.580
PLAC8L1
PLAC8 like 1.
      
 0.578
AOC2
Amine oxidase copper containing 2.
      
 0.452
DPM1
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
      
 0.449
CTNS
Cystinosin, lysosomal cystine transporter.
      
 0.449
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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