STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CATSPERGCation channel sperm associated auxiliary subunit gamma. (1153 aa)    
Predicted Functional Partners:
CATSPER1
Cation channel sperm associated 1.
    
 0.993
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
  
 
 0.986
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
   
 0.983
CATSPER3
Cation channel sperm associated 3.
    
 0.972
CATSPER2
Cation channel sperm associated 2.
    
 0.968
CATSPER4
Cation channel sperm associated 4.
    
 0.944
CATSPERE
Catsper channel auxiliary subunit epsilon.
    
 0.924
ENSCWAP00000023291
annotation not available
    
 0.915
CACNA1H
Calcium voltage-gated channel subunit alpha1 H.
    
 0.902
CACNA1G
Calcium voltage-gated channel subunit alpha1 G.
    
 0.902
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.