STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC70Coiled-coil domain containing 70. (219 aa)    
Predicted Functional Partners:
STX5
Syntaxin 5.
   
 0.960
GOSR1
Golgi SNAP receptor complex member 1.
    
 0.951
USO1
USO1 vesicle transport factor.
   
 0.935
RAB1B
RAB1B, member RAS oncogene family.
    
 0.890
RAB1A
RAB1A, member RAS oncogene family.
    
 0.890
GORASP2
Golgi reassembly stacking protein 2.
    
 0.857
GORASP1
Golgi reassembly stacking protein 1.
    
 0.857
FATE1
Fetal and adult testis expressed 1.
    
   0.804
SCFD1
Sec1 family domain containing 1.
   
 0.745
LMAN1
Lectin, mannose binding 1.
   
 
 0.742
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.