STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR47WD repeat domain 47. (929 aa)    
Predicted Functional Partners:
CAMSAP3
Calmodulin regulated spectrin associated protein family member 3.
    
 
 0.910
CAMSAP2
Calmodulin regulated spectrin associated protein family member 2.
 
  
 
 0.848
AGO2
Argonaute RISC catalytic component 2.
    
   0.795
FBXO33
F-box protein 33.
      
 0.720
ENSCWAP00000009988
annotation not available
      
 0.697
CNOT6
CCR4-NOT transcription complex subunit 6.
      
 0.668
CAMSAP1
Calmodulin regulated spectrin associated protein 1.
   
 
 0.623
WDR63
WD repeat domain 63.
      
 0.608
LSMEM2
Leucine rich single-pass membrane protein 2.
      
 0.583
ARHGEF12
Rho guanine nucleotide exchange factor 12.
      
 0.579
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.