STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM171Transmembrane protein 171. (325 aa)    
Predicted Functional Partners:
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
   0.799
NEDD4L
NEDD4 like E3 ubiquitin protein ligase.
    
   0.782
ENSCWAP00000016951
annotation not available
      
 0.774
GPR137C
G protein-coupled receptor 137C.
      
 0.754
ITCH
Itchy E3 ubiquitin protein ligase.
    
   0.735
MANSC1
MANSC domain containing 1.
      
 0.727
RETREG3
Reticulophagy regulator family member 3.
      
 0.697
TMEM132E
Transmembrane protein 132E.
      
 0.684
CKAP2
Cytoskeleton associated protein 2.
    
 
 0.675
FAM189A2
Family with sequence similarity 189 member A2.
      
 0.625
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.