Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAXBP1PAX3 and PAX7 binding protein 1. (915 aa)    
Predicted Functional Partners:
TFIP11
Tuftelin interacting protein 11.
   
 0.970
CDC40
Cell division cycle 40.
    
 0.953
DHX15
DEAH-box helicase 15.
   
 0.951
RSRC1
Arginine and serine rich coiled-coil 1.
    
   0.948
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
    
 
 0.948
DDX23
DEAD-box helicase 23.
    
   0.948
GCFC2
GC-rich sequence DNA-binding factor 2.
    
   0.947
SYF2
SYF2 pre-mRNA splicing factor.
    
  0.946
CWF19L2
CWF19 like cell cycle control factor 2.
   
  0.943
PPIL1
Peptidylprolyl isomerase like 1.
    
  0.938
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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