STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB6ARAB6A, member RAS oncogene family. (208 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.951
VPS39
VPS39 subunit of HOPS complex.
    
 
 0.934
RABGAP1
RAB GTPase activating protein 1.
    
 0.927
GCC2
GRIP and coiled-coil domain containing 2.
    
 0.923
GDI2
GDP dissociation inhibitor 2.
   
 0.922
GDI1
GDP dissociation inhibitor 1.
   
 0.922
BICD1
BICD cargo adaptor 1.
    
 0.917
ARL1
ADP ribosylation factor like GTPase 1.
   
 0.904
KIF20A
Kinesin family member 20A.
    
 
 0.900
BICD2
BICD cargo adaptor 2.
    
 0.886
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.