STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM174Transmembrane protein 174. (242 aa)    
Predicted Functional Partners:
CMTM7
CKLF like MARVEL transmembrane domain containing 7.
    
   0.791
CDKL1
Cyclin dependent kinase like 1.
      
 0.636
TMEM171
Transmembrane protein 171.
      
 0.602
LRRC31
Leucine rich repeat containing 31.
      
 0.589
ENSCWAP00000003322
annotation not available
      
 0.587
ENSCWAP00000003327
annotation not available
      
 0.587
SZRD1
SUZ RNA binding domain containing 1.
      
 0.587
NIPBL
NIPBL cohesin loading factor.
      
 0.582
ENSCWAP00000020224
annotation not available
      
 0.573
ENSCWAP00000004187
annotation not available
      
 0.566
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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