STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C21orf62Chromosome 21 open reading frame 62. (219 aa)    
Predicted Functional Partners:
SAYSD1
SAYSVFN motif domain containing 1.
      
 0.583
ITGBL1
Integrin subunit beta like 1.
      
 0.563
GART
annotation not available
      
 0.540
SEL1L2
SEL1L2 adaptor subunit of ERAD E3 ligase.
      
 0.538
OLIG1
Oligodendrocyte transcription factor 1.
      
 0.521
TMIGD3
Transmembrane and immunoglobulin domain containing 3.
      
 0.492
ITPRID2
ITPR interacting domain containing 2.
      
 0.488
FRRS1L
Ferric chelate reductase 1 like.
      
 0.488
ZNF106
Zinc finger protein 106.
      
 0.487
PAXBP1
PAX3 and PAX7 binding protein 1.
 
    
 0.474
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.