STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXD1Forkhead box D1. (465 aa)    
Predicted Functional Partners:
TIMM8B
Translocase of inner mitochondrial membrane 8 homolog B.
    
   0.710
TIMM8A
Translocase of inner mitochondrial membrane 8A.
    
   0.710
TIMM13
Translocase of inner mitochondrial membrane 13.
    
   0.710
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.664
SIRT5
Sirtuin 5.
    
 0.659
SIRT1
Sirtuin 1.
    
 0.659
KCTD2
Potassium channel tetramerization domain containing 2.
    
  0.643
SGK3
Serum/glucocorticoid regulated kinase family member 3.
    
 0.642
CREBBP
CREB binding protein.
    
 0.634
EP300
E1A binding protein p300.
    
 0.634
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.