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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLIG1Oligodendrocyte transcription factor 1. (273 aa)    
Predicted Functional Partners:
SH2D1B
SH2 domain containing 1B.
    
 
 0.744
SOX10
SRY-box transcription factor 10.
   
 
 0.713
GFAP
Glial fibrillary acidic protein.
   
  
 0.664
MBP
Myelin basic protein.
   
  
 0.663
PDGFRA
Platelet derived growth factor receptor alpha.
      
 0.662
MYRF
Myelin regulatory factor.
      
 0.659
CNP
2',3'-cyclic nucleotide 3' phosphodiesterase.
      
 0.646
FOXJ3
Forkhead box J3.
      
 0.641
ASCL1
Achaete-scute family bHLH transcription factor 1.
    
 
 0.627
C21orf62
Chromosome 21 open reading frame 62.
      
 0.616
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.