STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OLIG1Oligodendrocyte transcription factor 1. (273 aa)    
Predicted Functional Partners:
SOX10
SRY-box transcription factor 10.
   
 
 0.827
GFAP
Glial fibrillary acidic protein.
   
 
 0.760
TCF3
Transcription factor 3.
    
 
 0.715
ASCL1
Achaete-scute family bHLH transcription factor 1.
    
 
 0.682
SOX8
SRY-box transcription factor 8.
   
 
 0.675
NKX2-2
NK2 homeobox 2.
   
 0.668
TCF7L2
Transcription factor 7 like 2.
    
 
 0.599
TBR1
T-box brain transcription factor 1.
    
 
 0.598
PDGFRA
Platelet derived growth factor receptor alpha.
    
 
 0.596
MBP
Myelin basic protein.
   
  
 0.596
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.