Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM45Tripartite motif containing 45. (580 aa)    
Predicted Functional Partners:
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 
 0.858
ZNF227
Zinc finger protein 227.
    
 
 0.834
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
 0.785
TAB3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 
 0.721
STAC
SH3 and cysteine rich domain.
    
 
 0.685
SORBS1
Sorbin and SH3 domain containing 1.
    
 
 0.676
FCHSD2
FCH and double SH3 domains 2.
      
 0.667
SPART
Spartin.
      
 0.665
TRAT1
T cell receptor associated transmembrane adaptor 1.
      
 0.616
KNOP1
Lysine rich nucleolar protein 1.
      
 0.601
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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