STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHTOPChromatin target of PRMT1. (249 aa)    
Predicted Functional Partners:
SARNP
SAP domain containing ribonucleoprotein.
   
 0.995
THOC7
THO complex 7.
    
 0.986
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.984
THOC5
THO complex 5.
   
 0.979
ENSCWAP00000019748
annotation not available
    
 0.977
THOC1
THO complex 1.
    
 0.976
DDX39B
DExD-box helicase 39B.
   
 0.973
DDX39A
DExD-box helicase 39A.
   
 0.973
THOC2
THO complex 2.
   
 0.964
ALYREF
Aly/REF export factor.
   
 0.964
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.